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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs773110 chr12:56375137 C/G RPS26P11 chrX:71264395-71264742:+ 0.5 8.87 1.49E-17 Box Plot
THCA rs773111 chr12:56375740 C/A RPS26P11 chrX:71264395-71264742:+ 0.5 8.87 1.49E-17 Box Plot
THCA rs773112 chr12:56375881 C/T RPS26P11 chrX:71264395-71264742:+ 0.5 8.83 1.96E-17 Box Plot
THCA rs773114 chr12:56379060 A/T RPS26P11 chrX:71264395-71264742:+ 0.61 12.16 7.84E-30 Box Plot
THCA rs7732930 chr5:176548594 C/T LOC388955 chr2:63849182-63850159:- -0.77 -20.22 3.59E-66 Box Plot
THCA rs7732941 chr5:49768227 C/A LOC647121 chr1:121260910-121313686:+ -0.37 -7.92 1.67E-14 Box Plot
THCA rs7732970 chr5:45452146 C/T LOC647121 chr1:121260910-121313686:+ 0.35 7.43 5.0E-13 Box Plot
THCA rs7736561 chr5:45716396 C/T LOC647121 chr1:121260910-121313686:+ 0.38 8.25 1.6E-15 Box Plot
THCA rs7739216 chr6:28079946 G/T BTN3A2 chr6:26365387-26378548:+ -0.29 -6.1 2.25E-9 Box Plot
THCA rs7740026 chr6:151750763 C/T NEK5 chr13:52607747-52703214:- 0.6 6.88 1.86E-11 Box Plot
THCA rs7740487 chr6:28216486 C/G BTN3A2 chr6:26365387-26378548:+ -0.54 -10.42 4.69E-23 Box Plot
THCA rs77407090 chr10:89979820 G/A PPP1R12A chr12:80167343-80329240:- 0.44 6.51 1.96E-10 Box Plot
THCA rs7741193 chr6:151769132 G/A NEK5 chr13:52607747-52703214:- 0.44 6.25 8.97E-10 Box Plot
THCA rs7746643 chr6:26623996 G/A ZNF322B chr9:99957633-99961910:- 0.76 15.67 6.06E-45 Box Plot
THCA rs77475133 chr11:60202117 T/A PRDM6 chr5:122424816-122529960:+ 0.58 5.87 8.01E-9 Box Plot